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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813605.1_cds_XP_016497619.1_11734
CDS Infomation

[gene=LOC107816413] [db_xref=GeneID:107816413] [protein=cleavage and polyadenylation specificity factor subunit 3-I-like] [partial=3'] [protein_id=XP_016497619.1] [location=join(54428..54580,54670..54767,58383..58428,58512..58661,62603..63040,63195..>63629)] [gbkey=CDS]
Sequence

ATGGCATCTATTGGACAACCACAGTCATCTTTGAAGAGACCTAGTCCTGCAGTTAACAGA
GAAGGAGATAAACTCATTATCACTCCTTTAGGGGCTGGGAATGAAGTGGGACGGTCCTGC
GTTTACATGTCTTTCAAAGGAAAAACAGTCTTGTTTGACTGTGGCATTCATCCAGCTTAC
TCAGGCATGGCTGCTTTGCCGTATTTTGATGAAATTGATCCTTCAACTATTGATGTTCTT
CTAATAACCCATTTTCACTTAGATCATGCTGCCTCCCTTCCTTATTTCCTCGAAAAGACT
ACATTTAAAGGGCGCGTATTTATGACTCATGCAACAAAGGCCATATACAAGTTGCTTTTG
TCAGATTATGTTAAAGTGAGCAAAGTTTCAGTTGAAGATATGTTGTTTGATGAAAATGAT
ATTAGTAGCTCCATGGACAAAATTGAGGTTGTCGACTTCCATCAGACTATGGAAGTAAAT
GACATTCGCTTTTGGTGTTATACTGCCGGTCATGTCCTTGGTGCTGCCATGTTTATGGTT
GATATTGCTGGTGTTCGAGTTCTCTATACAGGAGACTACTCCCGTGAAGAAGACAGGCAT
CTCCGTGCTGCTGAGACCCCAGAATTTTCTCCAGATATTTGCATTATAGAATCAACTTAT
GGTGTTCAACTCCATATGCCACGTCAGATAAGAGAGAAGCTTTTCACTGATGTGATACAC
TCAACACTCATGCAAGGGGGTCGGGTGCTGATTCCTGCTTTCGCCTTGGGACGTGCACAG
GAACTTCTCCTTATCCTGGAGGAATATTGGTCTAACCATCCTGAACTTGCTAATTTCCCC
ATATATTATGCTTCTCCACTTGCAAGAAGGTGTATGGCTGTCTATATGGCAAGCCCAGGT
AGTCTTCAAAGTGGTTTGTCAAGGCAGCTGTTCGATAAATGGTGCTCTGACAAGAAAAAT
GCTTGTGTTATACCTGGGTATGTGGTGGAAGGGACCTTGGCGAAGACTATCATCAATGAA
CCGAAGGAAGTCACCTTACAAAATGGCTTGAGTGCTCCACTTAATATGCAGGTTCATTAT
ATTTCATTCTCAGCTCACGCGGATTATGCTCAGACTAGTACCTTCTTGAAAGAACTTATG
CCTCCCAACATAATTCTAGTCCATGGAGAGGCTAATGAGATGGGAAGGCTCAAGCAGAAA
CTTACCTCCCTCTTTGCTGATGGCAATACTAAAATAATTACGCCCAAGAACTGCCAATCA
GTTGAAATGCACTTCAACTCTGAGAAAATGGCTAAAACTGTTGGAAAGCTGGCTGAAAAG

Peptide Sequence

PEP ID

XP_016497619.1
PEP Infomation

PREDICTED: cleavage and polyadenylation specificity factor subunit 3-I-like, partial [Nicotiana tabacum]
Sequence

MASIGQPQSSLKRPSPAVNREGDKLIITPLGAGNEVGRSCVYMSFKGKTVLFDCGIHPAY
SGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLL
SDYVKVSKVSVEDMLFDENDISSSMDKIEVVDFHQTMEVNDIRFWCYTAGHVLGAAMFMV
DIAGVRVLYTGDYSREEDRHLRAAETPEFSPDICIIESTYGVQLHMPRQIREKLFTDVIH
STLMQGGRVLIPAFALGRAQELLLILEEYWSNHPELANFPIYYASPLARRCMAVYMASPG
SLQSGLSRQLFDKWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLQNGLSAPLNMQVHY
ISFSAHADYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLTSLFADGNTKIITPKNCQS
VEMHFNSEKMAKTVGKLAEK

Transcript Sequence

Gene sequence data has not been registered.